facilityepimath - Analyze Mathematical Models of Healthcare Facility Transmission
Calculate useful quantities for a user-defined
differential equation model of infectious disease transmission
among individuals in a healthcare facility. Input rates of
transition between states of individuals with and without the
disease-causing organism, distributions of states at facility
admission, relative infectivity of transmissible states, and
the facility length of stay distribution. Calculate the model
equilibrium and the basic facility reproduction number, as
described in Toth et al. (2025)
<doi:10.1101/2025.02.21.25322698>.