Package: facilityepimath
Title: Analyze Mathematical Models of Healthcare Facility Transmission
Version: 0.2.3
Authors@R: 
    c(person("Damon", "Toth", , "damon.toth@hsc.utah.edu", role = c("aut", "cre", "cph"),
           comment = c(ORCID = "0000-0001-7393-4814")),
      person("Centers for Disease Control and Prevention", role="fnd",
      comment = "Modeling Infectious Diseases in Healthcare Network award number
      U01CK000585 and Insight Net award number CDC-RFA-FT-23-0069"))
Description: Calculate useful quantities for a user-defined
        differential equation model of infectious disease transmission
        among individuals in a healthcare facility. Input rates of
        transition between states of individuals with and without the
        disease-causing organism, distributions of states at facility
        admission, relative infectivity of transmissible states, and
        the facility length of stay distribution. Calculate the model
        equilibrium and the basic facility reproduction number, as
        described in Toth et al. (2025)
        <doi:10.1371/journal.pcbi.1013577>.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
URL: https://github.com/EpiForeSITE/facilityepimath
BugReports: https://github.com/EpiForeSITE/facilityepimath/issues
Imports: MASS
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
Config/testthat/edition: 3
Config/Needs/website: brand.yml
VignetteBuilder: knitr
Config/roxygen2/version: 8.0.0
Repository: https://epiforesite.r-universe.dev
Date/Publication: 2026-10-02 23:54:08 UTC
RemoteUrl: https://github.com/EpiForeSITE/facilityepimath
RemoteRef: HEAD
RemoteSha: 09d8cc1c612c3021d52aa4f171036507fb0b08a2
NeedsCompilation: no
Packaged: 2026-10-03 02:20:03 UTC; root
Author: Damon Toth [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0001-7393-4814>),
  Centers for Disease Control and Prevention [fnd] (Modeling Infectious
    Diseases in Healthcare Network award number U01CK000585 and Insight
    Net award number CDC-RFA-FT-23-0069)
Maintainer: Damon Toth <damon.toth@hsc.utah.edu>