Package: branchingprocess
Title: Calculate Outbreak Probabilities for a Branching Process Model
Version: 0.2.0
Authors@R: 
    c(person("Damon", "Toth", , "damon.toth@hsc.utah.edu", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-7393-4814")),
           person("Erin", "Clancey", , "erin.clancey@wsu.edu", role = c("ctb"),
           comment = c(ORCID = "0000-0003-4728-4023")),
           person("Centers for Disease Control and Prevention's Center for Forecasting and Outbreak Analytics",
           role="fnd", comment = "Cooperative agreement CDC-RFA-FT-23-0069"))
Description: Quantify outbreak risk posed by individual importers of a
        transmissible pathogen. Input parameters of negative binomial
        offspring distributions for the number of transmissions from
        each infected individual and initial number of infected.
        Calculate probabilities of final outbreak size and generations
        of transmission, as described in Toth et al. (2015)
        <doi:10.3201/eid2108.150170> and Toth et al. (2016)
        <doi:10.1016/j.epidem.2016.04.002>.
License: MIT + file LICENSE
Encoding: UTF-8
URL: https://github.com/EpiForeSITE/branchingprocess,
        https://epiforesite.github.io/branchingprocess/
BugReports: https://github.com/EpiForeSITE/branchingprocess/issues
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Imports: stats
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr
Config/testthat/edition: 3
Config/Needs/website: brand.yml
Repository: https://epiforesite.r-universe.dev
Date/Publication: 2026-10-02 23:53:13 UTC
RemoteUrl: https://github.com/EpiForeSITE/branchingprocess
RemoteRef: HEAD
RemoteSha: 9a2147b8e37137ab45f3ca223096704a9896cd8b
NeedsCompilation: no
Packaged: 2026-10-09 12:06:51 UTC; root
Author: Damon Toth [aut, cre] (ORCID: <https://orcid.org/0000-0001-7393-4814>),
  Erin Clancey [ctb] (ORCID: <https://orcid.org/0000-0003-4728-4023>),
  Centers for Disease Control and Prevention's Center for Forecasting and
    Outbreak Analytics [fnd] (Cooperative agreement CDC-RFA-FT-23-0069)
Maintainer: Damon Toth <damon.toth@hsc.utah.edu>